Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825720.1_cds_XP_016502420.1_16064
CDS Infomation

[gene=LOC107820619] [db_xref=GeneID:107820619] [protein=transcription factor bHLH78-like] [protein_id=XP_016502420.1] [location=join(39819..40829,41522..41587,41701..41769,41870..41941,42158..42229,42342..42432,42704..42723)] [gbkey=CDS]
Sequence

ATGGACAAAGACTACTTCTCTAATGGTGGAATTCCACCACCCCTCCAATTTGAACCCAAA
ATTCCATTAAATTCCCTATTTTCACCTCATGAACTAAACTCCATTTCAGATCAATACACC
CAATTTGATTCAGCTTTGAGCTCCATGGTCTCATCTCCTGTTGCCTCCAATTCTATAAAT
TCCAACGATAATTTCGCACTCCACGAATTAATTGGAAAATTAGGCACAATTTGTAGCTCT
CCTTCACCTCAACTCACTGATTATGCTGTGAATTATGATCATATTAATAACAGTGATTCC
ACTATGACTTCATGTTATACTACACCTTTAAACTCTCCTCCAAAATTACGAGATAATATA
CCAAATTTTGATATTTCGGTTCCAATAAATCTTCCTCAATTTCCTACATTTTCAGCTAAT
CCAGAGTTTTCACATAGAGCTGCTAAATTTTCTTATTTTGGTAGCTGTAGTTTTAATGGC
AGAACGAGTCAATTTGGGACAGAATTGAGTCATAGATCTAGGAATGAGCCTATGGGAAGT
GTAAAATTATCTAGAATATCGAGTAGCCCTTCTCTTGTACTACAGAACAAAAATTCAGGC
CAAACACAGGAGGAAATGATGTTTGAAAATTTGGATTTGGGCAAAAATTCAGGTCCTAAT
AATGCCAATTCCAATGAAGAGTGTTCTATTTCTAAGCAAATCCCAAGTGGTGAAATGGGG
TTAAAAACTTCAAATGTAATGAATTCTAGGAAAAGAAAAACAGTTTCAAGAGGAAAAGGA
AAGAGCTATAATGGGGCTGAAGAAGCTGAAGATGGTACAAAGGAAAAGAGATCTAAATCA
ACAGAAGGTAATGGGAAGAAAAATGGAACAGTTAAAATGGAGGAAACAAATGGTAGTGAA
TGTGATGAAACTGAGAAAGAAGGAAAGGAAGAGCAAAAGCCAACAAAGGATTGGATTCAT
GTTAGAGCAAGAAGAGGTCAAGCTACTGATAGTCATAGTCTAGCTGAAAGAGTTCGTAGA
GAGAAGATCAGTCAAAGAATGAAGTTTTTGCAAGATCTTGTACCAGGCTGTAATAAGGTG
ACTGGAAAAGCATTAATGCTCGACGAAATTATAAATTATGTACAGTCACTCCAACGCCAA
GTTGAGTTCCTATCCATGAAGTTGGCTTCAGTGAACCCAAGAATGGATTTTCACATAGAT
AATTTCCTCTCAAAAGATATATGTCAACCAAATGGCTCTTTTTCCCAACAAGTGTTCCCG
CTAGATGGATTTTGTGAAAATCTTACTCAGCTTCACACAATCTGTGAGGATGAACTGCAA
ACAATTGTTCAGATGGGTTTTAGCCACCAGGATTTAACATTACAGTCACAAGCTTTTCCT
GCGCCTAATTCGACGTCTTAA

Peptide Sequence

PEP ID

XP_016502420.1
PEP Infomation

PREDICTED: transcription factor bHLH78-like [Nicotiana tabacum]
Sequence

MDKDYFSNGGIPPPLQFEPKIPLNSLFSPHELNSISDQYTQFDSALSSMVSSPVASNSIN
SNDNFALHELIGKLGTICSSPSPQLTDYAVNYDHINNSDSTMTSCYTTPLNSPPKLRDNI
PNFDISVPINLPQFPTFSANPEFSHRAAKFSYFGSCSFNGRTSQFGTELSHRSRNEPMGS
VKLSRISSSPSLVLQNKNSGQTQEEMMFENLDLGKNSGPNNANSNEECSISKQIPSGEMG
LKTSNVMNSRKRKTVSRGKGKSYNGAEEAEDGTKEKRSKSTEGNGKKNGTVKMEETNGSE
CDETEKEGKEEQKPTKDWIHVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKV
TGKALMLDEIINYVQSLQRQVEFLSMKLASVNPRMDFHIDNFLSKDICQPNGSFSQQVFP
LDGFCENLTQLHTICEDELQTIVQMGFSHQDLTLQSQAFPAPNSTS

Transcript Sequence

Gene sequence data has not been registered.